Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015790594.1_cds_XP_016502462.1_1522
CDS Infomation

[gene=LOC107820655] [db_xref=GeneID:107820655] [protein=tubulin gamma-1 chain] [protein_id=XP_016502462.1] [location=complement(join(22235..22303,22380..22484,23542..23670,24251..24295,24395..24469,24953..25057,25131..25184,25769..26169,26282..26393,26748..26948,28270..28398))] [gbkey=CDS]
Sequence

ATGCCGAGAGAAATTATAACACTGCAAGTTGGACAATGCGGGAACCAGATCGGAATGGAG
TTCTGGAAACAGCTGTGCCTCGAACACGGTATCAGTAAAGAAGGCATTCTTGAAGATTTT
GCTACTCAGGGAGGTGATAGAAAAGATGTATTTTTCTATCAAGCGGACGACCAACACTAC
ATACCTCGAGCATTATTGATGGATCTAGAGCCCAGAGTGATTAACGGTATACAAAATGGT
GAATATAGGAATCTCTACAATCATGAGAATGTATTCATTGCAGATCATGGAGGAGGTGCT
GGAAATAATTGGGCAAGCGGATATCATCAGGGTAAGCAATATGAGGAGGATCTAATGGAC
ATGATTGATAGGGAAGCAGATGGAAGCGATAGTCTCGAGGGTTTTGTTCTATGCCATTCA
ATTGCCGGTGGAACTGGCTCAGGCATGGGCTCATATATATTGGAAACTCTGAATGATCGC
TACAGCAAAAAGCTTGTTCAAACCTACAGCGTTTTTCCTAACCAAAATGAGACAAGTGAT
GTGGTTGTACAACCTTATAATTCCCTTTTGACACTCAAGCGTCTGACATTGAATGCGGAT
TGTGTAGTTGTACTTGATAATACCGCACTCAATAGAATTGCTGTGGAACGCCTGCATATT
ACAACTCCCACTTTTGCTCAAACAAATTCATTAGTCTCTACTGTAATGTCAGCAAGTACA
ACCACACTACGTTACCCAGGATACATGAATAACGACTTGGTTGGCCTCCTTGCTTCGTTG
ATACCTACACCAAGATGCCATTTTCTTATGACCGGGTATACTCCACTCACTGTGGAACGT
CAAGCTAATGTAATTCGGAAGACAACTGTACTTGATGTCATGAGAAGGCTCCTTCAGACC
AAGAATATCATGGTTTCCTCCTATGCTCGAACAAAGGAAGCCAGTCAGGCTAAATACATA
TCCATATTAAACATTATTCAGGGAGAAGTTGATCCCACTCAGGTCCATGAAAGCCTGCAG
AGAATAAGGGAAAGAAAGCTTGTTAATTTTATTGACTGGGGCCCTGCTAGCATTCAGGTT
GCTTTATCTAGGAAGTCTCCTTATGTCCAGACGGCTCATAGGGTTAGTGGTCTCATGCTC
GCTAGCCATACTGGCATCCGGCACTTATTCAGCAAGTGTTTGAGCCAGTACGATAAATTG
AGAAAGAGACAAGCCTTCCTTGACAACTATAGGAATCATCCAACGTTTGCCGACAATGAC
CTATCAGAATTTGACGAATCTAGAGATGTGATTGAAAGTCTAGTTGACGAGTACAAGGCT
TGTGAGTCCCCAGATTACATCAAATGGGGAATGGAGGATCCCGACCATGTTCTAACAGGC
GAAGGAAATGCTAGTGGGACAGTTGATCCCAAGTTATCTTTATGA

Peptide Sequence

PEP ID

XP_016502462.1
PEP Infomation

PREDICTED: tubulin gamma-1 chain [Nicotiana tabacum]
Sequence

MPREIITLQVGQCGNQIGMEFWKQLCLEHGISKEGILEDFATQGGDRKDVFFYQADDQHY
IPRALLMDLEPRVINGIQNGEYRNLYNHENVFIADHGGGAGNNWASGYHQGKQYEEDLMD
MIDREADGSDSLEGFVLCHSIAGGTGSGMGSYILETLNDRYSKKLVQTYSVFPNQNETSD
VVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHITTPTFAQTNSLVSTVMSAST
TTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQT
KNIMVSSYARTKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIDWGPASIQV
ALSRKSPYVQTAHRVSGLMLASHTGIRHLFSKCLSQYDKLRKRQAFLDNYRNHPTFADND
LSEFDESRDVIESLVDEYKACESPDYIKWGMEDPDHVLTGEGNASGTVDPKLSL

Transcript Sequence

Gene sequence data has not been registered.